Browse of TCMCG066C27354 protein

CDS

Accession Number	TCMCG066C27354
gbkey	CDS
Protein Id	XP_034602737.1
Location	complement(join(21926928..21926930,21927029..21927637,21927725..21927877,21928004..21928219,21928359..21928449,21928522..21929858,21931057..21931137))
Gene	LOC117863227
GeneID	117863227
Organism	Setaria viridis

Protein

Length	829aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA633601
db_source	XM_034746846.1
Definition	protein JOKA2-like isoform X2 [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category	S
Description	Ig-like domain from next to BRCA1 gene
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03029        [VIEW IN KEGG] ko04131        [VIEW IN KEGG]
KEGG_ko	ko:K17987        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04137        [VIEW IN KEGG] map04137        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005515        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005768        [VIEW IN EMBL-EBI] GO:0005770        [VIEW IN EMBL-EBI] GO:0005773        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0006914        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009056        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0012505        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0016236        [VIEW IN EMBL-EBI] GO:0022607        [VIEW IN EMBL-EBI] GO:0031410        [VIEW IN EMBL-EBI] GO:0031982        [VIEW IN EMBL-EBI] GO:0032182        [VIEW IN EMBL-EBI] GO:0034622        [VIEW IN EMBL-EBI] GO:0043130        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043933        [VIEW IN EMBL-EBI] GO:0044085        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044248        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0051258        [VIEW IN EMBL-EBI] GO:0051259        [VIEW IN EMBL-EBI] GO:0061919        [VIEW IN EMBL-EBI] GO:0065003        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0097708        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGACGCTTTCGGGACCGCGCCGATGGGGTACGGCCGCGCGTGGCCGCTCGTCGACGACTCCCGGGATCTCGTCGTCAAGGTCAAATATGGTGACACTTTGAAGCGATTCAATGCTCGTGTTAATGGCTCACGCTTCGATCATGATCTGCCTGCCCTTCGGTTGAAGATTGCAAGTGCTTTTAAGTTCAGTCCTGATGCTGAATTCATTCTCACCTATACTGATGAGGATGGGGATGTCGTCATGCTGGATGATGATAATGATCTACGAGATGCTGCTATTAATCAGAAATTGAACCCTCTTAGGATTAATGTTCAGTTGAAGAGCAGCAATGTTGGGGCAGCTCAGACAAAACAGCAGGCCACAAATTCCAAATCTTCGAGGTCCATCTCTCTCGAAGATCAACTTGCCCAGGTGAAATCAGCTATTGATGAAGCTTTGAAGTTTGTGCCAGAGCAAGTCCCTGCTGTCCTTGCAAAATTATCTCATGACTTGCGTTTTAGAGCTGCATCATCTGCACCATCATTGGCTGAGTTGCTGGACCGTTTTGCTAAACTGATAACACGAGGCAGCAACATGCATCCTTCTTGTGGCTTTGCTGATAGTTCTCAAAAATTGAGAAGTGCAAAGGTTAAGCTTGAGTCTGCCCTTGTCACAGGTTCAGCTTCAGAGACCTCGTATGGGCAAAATTCTGGGATATCTGAAGCTGGTCTTAGGGGTGTGCTATCTGAGGATCCCAATGCTAAAATTGAACAGGTGCCATCATGCCCTTCAGTTAGGGATTCACTGGTTTTTACTAGTTCAGGTGGAATGAAAGGTGATCACAAGAGAAGTCTTGATTCTGAGATTAAGATAAAATCTGATGCTCACAGTAAAGGAAAATCTGTATTATCCTCTTGGCCACCGGTTTCCACCACTTCTCATGGCGCTCCTGCTCAAGGATCTGTTCCTGTACCATTTAAATCTCTTGGATCCATTGGAATGGCCAATGGTGATATAATGCCGCTATTCCCTCCCCCACCAGTGTACCAACCTCCCACACCTGTACTCTACCCTCCTACACCATTTTTGACCCCCTTAAACCCAATCTCTGGAGCTAATGGAAAAACTACTGTTGATTTGCACTCAACGTTCCCCCCTCCACCCAACATCTATAGCCCTATTAAGTTGAATACACCTTCATCTGTTGGTACATGCTGTCCTAACCTCTACTCTACTGGGACTTCACACAGAGATGGCACAGGCCCATTGTCTAGTTATGTACCCAATCCAGAAGGCATCAACTCTTTTGGGAGCTCTTACAGAGGTCTTGGTACCAATTATAGGGGCATCCCCCTAAAATATGCACAGCATAGATGGATACAATGCGATGGATGTGGGGTGACGCCAATTGATGGGCCTTGCTACAAGTCTAATGTTAAAGAAGACTATGATCTGTGTGATGCCTGTTTTTCTCACATGGGCAATGAGGTTGAATATACCAGATTAGACGGTCCTGCTTCAAAAAGTAACATGAAGATCCTTGGGAAGGTTCCAGCAGTCAAAACTGACAGTCGCTTCATCAAGGATGTTACTGTCCCTGATGGAACACCAATGGCACCTTCAACTCCGTTTACCAAGATTTGGCGCATGCGTAACAATGGGTTTAGCAAGTGGCCGTATGGTACCCAGCTTCTCTGGGTTGGTGGAGATCGCTTAACATGTCTGAGTTCATTCAGATTAGCGATTTCAGCAAATGGGGGGCTAAATCCTTGCGAAGACACTGATGTTACTGTTGATTTTCTTGCCCCTGCGAAGCCTGGTAGGTACATATCTTACTGGAGATTGGCACTACCCTCAGGTCTGACATTTGGTCAGCAGATTTGGGTTCATATTGAGGTGGAGCAGCCTATTCAAACCAGCGGCGGCAAACAGGCTGCTGCAATAAACCGGAATCAGCTCCCTGAAGCTAACAGCACAAGGCCTTCTGCATTCAATATAAACAGTGCTCCTGTAAATTTTTTGTCTGGATGGCACGGCAGGCTTGAATGTGAAACCATGGAACCCAAGGAATCTGAACCAGTTCCTAGTGATATGTCCTCTGCCCCAGCAGCAGTTGAACCGGCGCAAATCCCAGTTACTGATGCTCCTGCCTCATCTGCCGAGGCTGCATTGGCTTCGATGCCTGCTGCTGTGCCTGCACCTGAAGCAATTCTCCTGCCCAAACCTGTGCCTGTGCCTGCACCTGTTAGTGCATCCGCACCTGCACCTGTTGCTGCTCCTGTTAGCATGCCTGTGGTTGCAGCAGCACCTGCTGCCCCTTTGGCTGAGGAAGTCGTCAACCACCTGCTGGAGGAGAAGATGATGAGTGAGCTTGAGGTACTGGGTTTCATGCAGGCTGACCTGAACAAGCAGATACTGAGGCAGAACAACTACGACCTGGAGCAGTCTGTTGTCGATCTCTGTGGCTTCAACGAGTGGGATCCCCTTGAGGTGTTCTCCGAACTGTGA

Protein:   MDAFGTAPMGYGRAWPLVDDSRDLVVKVKYGDTLKRFNARVNGSRFDHDLPALRLKIASAFKFSPDAEFILTYTDEDGDVVMLDDDNDLRDAAINQKLNPLRINVQLKSSNVGAAQTKQQATNSKSSRSISLEDQLAQVKSAIDEALKFVPEQVPAVLAKLSHDLRFRAASSAPSLAELLDRFAKLITRGSNMHPSCGFADSSQKLRSAKVKLESALVTGSASETSYGQNSGISEAGLRGVLSEDPNAKIEQVPSCPSVRDSLVFTSSGGMKGDHKRSLDSEIKIKSDAHSKGKSVLSSWPPVSTTSHGAPAQGSVPVPFKSLGSIGMANGDIMPLFPPPPVYQPPTPVLYPPTPFLTPLNPISGANGKTTVDLHSTFPPPPNIYSPIKLNTPSSVGTCCPNLYSTGTSHRDGTGPLSSYVPNPEGINSFGSSYRGLGTNYRGIPLKYAQHRWIQCDGCGVTPIDGPCYKSNVKEDYDLCDACFSHMGNEVEYTRLDGPASKSNMKILGKVPAVKTDSRFIKDVTVPDGTPMAPSTPFTKIWRMRNNGFSKWPYGTQLLWVGGDRLTCLSSFRLAISANGGLNPCEDTDVTVDFLAPAKPGRYISYWRLALPSGLTFGQQIWVHIEVEQPIQTSGGKQAAAINRNQLPEANSTRPSAFNINSAPVNFLSGWHGRLECETMEPKESEPVPSDMSSAPAAVEPAQIPVTDAPASSAEAALASMPAAVPAPEAILLPKPVPVPAPVSASAPAPVAAPVSMPVVAAAPAAPLAEEVVNHLLEEKMMSELEVLGFMQADLNKQILRQNNYDLEQSVVDLCGFNEWDPLEVFSEL